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A new version of phylogeny.fr is available.
Please try it:
NGphylogeny.fr
.
ProbCons 1.12 (
doc
)
1. Overview
2. Data & Settings
3. Results
Upload your set of sequences in FASTA, EMBL or NEXUS format from a file:
Or paste it here
(
load example of sequences
)
Maximum number of sequences is 200 for proteins and 200 for nucleic acids.
Maximum length of sequences is 2000 for proteins and 6000 for nucleic acids.
Names association
Optionally, you can specify the association between truncated taxon names (used in input data) and original long taxon names (human readable). Each short name of a line on the left will be associated to the long name of the corresponding line on the right.
Note:
line numbers leading each line will be automatically removed, don't worry about them.
Short names used in input data
Short names are the names used in the input data. Usually, theses names are short and only contain valid characters (no spaces, quotes and such).
Note:
a short name must be associated to one and only one long name.
Real long names (human readable)
Long names are explicit taxon names with unlimited length and can contain special characters.
Settings
Consistency reps:
0
1
2
3
Iterative refinement reps:
0
100
500
Pre-training reps:
0
1
2
3
4
5
20
100